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Hot Topics Workshop
HOT TOPICS: Mathematical and Statistical Methods for Visualization and Analysis of High Dimensional Data
Dec 9, 2004 to Dec 13, 2004

Organizer(s)

Gunnar Carlsson, Susan Holmes, Persi Diaconis
To apply for funding, you must register by Wed, Oct 13 2004.
Complex data sets lying in high-dimensional spaces are by now a commonplace occurrence in many parts of science. There are many sources for this kind of data, including biology (genetic networks, phylogenetic trees, food webs, protein folding data, and neural networks), communications (internet
data, cell phone networks), transportation problems, physics (even describing the position and momentum of a single particle requires six dimensions), and many others. The analysis of such data brings with it a set of di_cult challenges. An important one is the fact that high-dimensional sets cannot be visualized. Analysis and understanding of data sets in dimensions 1,2,and 3 is greatly simplified by visualization. It permits us to quickly identify qualitative aspects of the data, from which one can then frequently go further and obtain more precise quantitative information. This quick identification of qualitative aspects is typically unavailable in higher dimensions, and an important priority is to obtain methods to carry out such qualitative analysis, to act as substitutes for or complements to direct intuitive analysis. In recent years, there has been a great deal of work on the development of such methods, from a great variety of points of view and using a great variety of methods. The purpose of our meeting is to bring together mathematicians, statisticians, computer scientists, cognitive scientists, and learning theorists with two main goals, namely to
clarify the status of the latest developments, and to make connections between these obviously related directions of research.

Here is a list of some of the directions we expect to be represented at the meeting.

• Multidimensional scaling and extensions, including the ISOMAP and LLE algorithms of J.Tenenbaum and S. Roweis, respectively.

• Projection pursuit methods, including the applications of XGOBI, GGOBI, and other software.

• Differential geometric methods, variational approaches to segmentation of images, and R.Coifmans work on diffusion geometries and harmonic analysis.

 Topological methods, as exemplified by the work of H. Edelsbrunner and Carlsson-de Silva.

 Description and analysis of families of 2-dimensional shapes in 3-space, as considered by D.Mumford and Carlsson-Collins-Guibas-Zomorodian

 Study of data sets in spaces of phylogenetic trees embedded in the tree space of Billera- Holmes-Vogtmann.

Schedule of Talks

All talks will be in the lecture hall on the second floor at MSRI, 2850 Telegraph Avenue.

Thursday, December 9

8:30 - 9:00 Registration

9:00 - 9:15 Welcome and Introduction

9:15 - 10:15 Gunnar Carlsson
Algebraic Topology and Visualization

10:15 - 10:30 Morning Tea (Sixth floor)

10:30 - 11:15 Persi Diaconis
Projection Pursuit

11:30 - 12:30 Susan Holmes
Eigenspace Decompositions for Graphs

12:30 - 2:00 Lunch Break

2:00 - 3:00 Andreas Buja
Nonlinear Dimension Reduction

3:00 - 3:30 Afternoon Tea (Sixth floor)

3:30 - 5:00 Discussion Session
Moderators: Ed Wegman and Regina Liu


Friday, December 10

9:00 - 10:00 Gunnar Carlsson
Persistence with Applications

10:00 - 10:30 Morning Tea (Sixth floor)

10:30 - 11:15 Sam Roweis
Manifold Learning

11:30 - 12:30 Vin De Silva
Harmonic Forms in Computational Topology

12:30 - 2:00 Lunch Break

2:00 - 2:45 Carrie Grimes
Hessian-based Locally Linear Embedding

2:45 - 3:00 Afternoon Tea (Sixth floor)

3:00 - 5:00 Discussion about implementations:
Discussant leaders: Di Cook and Andreas Buja


Saturday, December 11

9:00 - 10:00 Rick Vitale
Gaussian Geometry

10:00 - 10:30 Morning Tea (Sixth floor)

10:30 - 11:15 Liza Levina
Dimension Estimation

11:30 - 12:15 Debbie Swayne
GGobi for Graphs

12:30 - 2:00 Lunch Break

2:00 - 2:45 Herbert Edelsbrunner
Protein Docking with Elevation

2:45 - 3:00 Afternoon Tea (Sixth floor)

3:00 - 3:50 Afra Zomorodian
Shape Description via Persistent Homology: Theory and Practice

4:00 - 5.00 Discussion about applications to Graphs
Discussion Leaders: Stephen North and Susan Holmes


Sunday, December 12

9:00 - 9:45 Di Cook
Genegobi

9:50 - 10:30 Robert Ghrist
Coordinate-free sensor networks

10:30 - 11:20 Tom Griffiths
A split-merge sampler for discovering classes in relational data

11:30 - 12:15 Hal Varian
Do not call list example.

11:30 - 2:00 Lunch Break

2:00 - 2:45 TBD

2:45 - 3:00 Afternoon Tea (Sixth floor)

3:00 - 5:00 TBD


Monday, December 13

This day is set aside for informal discussions and talks whose desirability
will emerge during the course of the workshop.

Funding

To apply for funding, you must register by Wed, Oct 13 2004. Click to Register
Students, recent Ph.D.'s, women, and members of underrepresented minorities are particularly encouraged to apply. Funding awards are made typically 6 weeks before the workshop begins. Requests received after the funding deadline are considered only if additional funds become available.
Schedule
Thursday, December 09, 2004
9:15AM - 10:15AM Gunnar Carlsson Algebraic Topology and Visualization [Video available]
10:30AM - 11:15AM Persi Diaconis Projection Pursuit [Video available]
11:30AM - 12:30PM Susan Holmes Eigenspace Decompositions for Graphs. [Video available]
2:00PM - 3:00PM Andreas Buja Nonlinear Dimension Reduction. [Video available]
Friday, December 10, 2004
null Carrie Grimes Hessian-based Locally Linear Embedding. [Video available]
9:00AM - 10:00AM Gunnar Carlsson Persistence with Applications [Video available]
10:30AM - 11:15AM Sam Roweis Manifold Learning [Video available]
11:30AM - 12:30PM Vin de Silva Harmonic Forms in Computational Topology. [Video available]
Saturday, December 11, 2004
9:00AM - 10:00AM Richard Vitale Gaussian Meets Minkowski [Video available]
10:30AM - 11:15AM Elizaveta Levina Dimension Estimation [Video available]
11:30AM - 12:15PM Deborah Swayne GGobi for Graphs. [Video available]
2:00PM - 2:45PM Herbert Edelsbrunner Protein Docking with Elevation. [Video available]
Sunday, December 12, 2004
9:00AM - 9:45AM Di Cook GeneGobi [Video available]
9:50AM - 10:30AM Coordinate-free Sensor Networks. [Video available]
10:30AM - 11:20AM Tom Griffiths A Split-Merge Sampler for Discovering Classes in Relational Data. [Video available]
2:00PM - 2:45PM Edward Wegman Text Data Mining with Minimal Spanning Trees. [Video available]


Questions about this workshop should be sent either by email to
or by regular mail to:
HOT TOPICS: Mathematical and Statistical Methods for Visualization and Analysis of High Dimensional Data
Mathematical Sciences Research Institute
17 Gauss Way, Berkeley, CA
94720-5070.
USA

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